euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

94 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip1814 chr1 75192898 75192898 - unknown germline . no 215 CRYZ
srip2072 chr1 83609736 83609736 - unknown germline . no 215 .
srip4113 chr1 149308428 149308428 + unknown germline . no 215 LOC645262
srip6000 chr1 192262261 192262261 - unknown germline . no 215 .
srip9701 chr10 76230337 76230337 . unknown germline . no 215 ADK
srip9798 chr10 82972200 82972200 . unknown germline . no 215 .
srip17656 chr11 104556129 104556129 - unknown germline . no 215 .
srip18126 chr11 111082407 111082407 . unknown germline . no 215 .
srip18230 chr11 112084613 112084613 + unknown germline . no 215 BCO2
srip19254 chr11 134305645 134305645 - unknown germline . no 215 .
srip19880 chr12 11219195 11219195 - unknown germline . no 215 PRH1-PRR4
srip21005 chr12 33325798 33325798 - unknown germline . no 215 .
srip22203 chr12 43256979 43256979 - unknown germline . no 215 .
srip29074 chr13 61462340 61462340 - unknown germline . no 215 .
srip30980 chr13 79259790 79259790 - unknown germline . no 215 .
srip31977 chr13 86340151 86340151 - unknown germline . no 215 .
srip33513 chr13 104296230 104296230 - unknown germline . no 215 .
srip35199 chr14 28301256 28301256 + unknown germline . no 215 .
srip35858 chr14 36674752 36674752 + unknown germline . no 215 .
srip36311 chr14 39875089 39875089 + unknown germline . no 215 FBXO33
srip39519 chr15 34031845 34031845 - unknown germline . no 215 RYR3
srip39730 chr15 37707887 37707887 - unknown germline . no 215 .
srip40229 chr15 47507335 47507335 - unknown germline . no 215 SEMA6D
srip42271 chr15 80619533 80619533 - unknown germline . no 215 LOC283688
srip42516 chr15 83551627 83551627 - unknown germline . no 215 HOMER2
srip45321 chr16 33977012 33977012 - unknown germline . no 215 .
srip45499 chr16 33992437 33992437 . unknown germline . no 215 .
srip46310 chr16 71028016 71028016 + unknown germline . no 215 HYDIN
srip46403 chr16 76865783 76865783 - unknown germline . no 215 .
srip47203 chr17 28398310 28398310 + unknown germline . no 215 EFCAB5
srip47693 chr17 32813627 32813627 + unknown germline . no 215 .
srip47998 chr17 61281460 61281460 - unknown germline . no 215 TANC2
srip50906 chr18 59466368 59466368 + unknown germline . no 215 .
srip54112 chr2 36381245 36381245 + unknown germline . no 215 .
srip54642 chr2 42051410 42051410 + unknown germline . no 215 .
srip60526 chr2 181000547 181000547 + unknown germline . no 215 .
srip63456 chr20 16479499 16479499 - unknown germline . no 215 KIF16B
srip64029 chr20 25895497 25895497 - unknown germline . no 215 .
srip64064 chr20 25903871 25903871 - unknown germline . no 215 .
srip64761 chr20 41952105 41952105 - unknown germline . no 215 .
srip65859 chr21 19517305 19517305 - unknown germline . no 215 .
srip67490 chr22 22486374 22486374 - unknown germline . no 215 IGL@
srip67842 chr22 22715595 22715595 + unknown germline . no 215 IGL@
srip68738 chr22 44324597 44324597 - unknown germline . no 215 PNPLA3
srip72829 chr3 58783871 58783871 + unknown germline . no 215 C3orf67
srip73374 chr3 59852896 59852896 + unknown germline . no 215 FHIT
srip74451 chr3 80590172 80590172 - unknown germline . no 215 .
srip77249 chr3 123590719 123590719 + unknown germline . no 215 MYLK
srip78647 chr3 151148549 151148549 - unknown germline . no 215 MED12L
srip80372 chr3 176091328 176091328 + unknown germline . no 215 .
srip81501 chr3 186372136 186372136 + unknown germline . no 215 .
srip82579 chr4 14849031 14849031 + unknown germline . no 215 .
srip83843 chr4 29321856 29321856 + unknown germline . no 215 .
srip84689 chr4 47007786 47007786 - unknown germline . no 215 .
srip87896 chr4 86607953 86607953 + unknown germline . no 215 ARHGAP24
srip90338 chr4 115132699 115132699 + unknown germline . no 215 .
srip90710 chr4 118765257 118765257 + unknown germline . no 215 .
srip90798 chr4 120717537 120717537 - unknown germline . no 215 .
srip93227 chr4 147953943 147953943 - unknown germline . no 215 .
srip96926 chr5 21873984 21873984 . unknown germline . no 215 CDH12
srip97052 chr5 25584628 25584628 . unknown germline . no 215 .
srip97727 chr5 33633341 33633341 - unknown germline . no 215 ADAMTS12
srip98660 chr5 49547715 49547715 . unknown germline . no 215 .
srip99501 chr5 68263468 68263468 - unknown germline . no 215 .
srip103889 chr5 137130152 137130152 - unknown germline . no 215 .
srip104323 chr5 147263419 147263419 - unknown germline . no 215 .
srip105819 chr5 164495152 164495152 - unknown germline . no 215 LOC100507193
srip108715 chr6 46310300 46310300 + unknown germline . no 215 .
srip112038 chr6 91669514 91669514 - unknown germline . no 215 .
srip113025 chr6 115109877 115109877 . unknown germline . no 215 .
srip113800 chr6 142450105 142450105 - unknown germline . no 215 .
srip114777 chr6 148195800 148195800 + unknown germline . no 215 .
srip116289 chr7 17094707 17094707 + unknown germline . no 215 .
srip118802 chr7 70188675 70188675 - unknown germline . no 215 AUTS2
srip119817 chr7 84901724 84901724 - unknown germline . no 215 .
srip122016 chr7 108325670 108325670 + unknown germline . no 215 .
srip122426 chr7 112789617 112789617 . unknown germline . no 215 .
srip127441 chr8 72399228 72399228 - unknown germline . no 215 .
srip128265 chr8 87315042 87315042 + unknown germline . no 215 .
srip132362 chr9 30495885 30495885 - unknown germline . no 215 .
srip132562 chr9 30674459 30674459 - unknown germline . no 215 .
srip133406 chr9 32463891 32463891 - unknown germline . no 215 DDX58
srip133628 chr9 34904794 34904794 - unknown germline . no 215 .
srip134529 chr9 94416762 94416762 - unknown germline . no 215 .
srip135087 chr9 105073661 105073661 + unknown germline . no 215 .
srip137243 chrX 54917144 54917144 + unknown germline . no 215 .
srip137344 chrX 55264659 55264659 - unknown germline . no 215 .
srip137568 chrX 55585154 55585154 - unknown germline . no 215 .
srip139709 chrX 98264284 98264284 . unknown germline . no 215 .
srip140080 chrX 102363181 102363181 + unknown germline . no 215 .
srip140814 chrX 119892837 119892837 - unknown germline . no 215 .
srip141386 chrX 129525275 129525275 - unknown germline . no 215 .
srip141972 chrX 140515265 140515265 - unknown germline . no 215 .
srip142236 chrY 9954640 9954640 + unknown germline . no 215 .